Category: 3. Business

  • Dana Incorporated Completes Sale of Off-Highway Business

    Dana Incorporated Completes Sale of Off-Highway Business

    MAUMEE, Ohio, Jan. 2, 2026 /PRNewswire/ — Dana Incorporated (NYSE: DAN) today announced the completion of its previously disclosed sale of the Off-Highway business to Allison Transmission Holdings, Inc. (NYSE: ALSN; “Allison”) for $2.7 billion.

    The transaction, valued at 7.5 times the Off-Highway business’s expected 2025 adjusted EBITDA, represents a significant milestone in Dana’s ongoing transformation strategy.

    “Closing this transaction marks an important step in Dana’s evolution,” said R. Bruce McDonald, Chairman and Chief Executive Officer of Dana. “We are now a more focused company, dedicated to serving light- and commercial-vehicle customers with both traditional and electrified systems. This divestiture, combined with the successful execution of our cost-reduction plan, will strengthen our balance sheet, improve margins, reduce complexity, and position us to accelerate innovation and growth in our core markets.”

    The proceeds of this transaction will enable the company to reduce debt by approximately $2 billion, achieving its target net leverage of 1x over the business cycle. Additionally, the company plans to return $1 billion to shareholders through 2027, including approximately $650 million already returned since the transaction was announced—an increase of $50 million compared to the prior target.

    Dana extends its sincere appreciation to the talented employees of the Off-Highway business. Their dedication and expertise have built a world-class organization, and we are confident they will continue to thrive as part of Allison.

    Goldman Sachs & Co. LLC and Morgan Stanley & Co. LLC served as Dana’s financial advisors. Paul, Weiss, Rifkind, Wharton & Garrison LLP provided legal counsel, and Ernst & Young LLP acted as transaction advisor.

    Non-GAAP Financial Information

    Adjusted EBITDA is a non-GAAP financial measure which we have defined as net income (loss) before interest, income taxes, depreciation, amortization, equity grant expense, restructuring expense, non-service cost components of pension and other postretirement benefit costs and other adjustments not related to our core operations (gain/loss on debt extinguishment, pension settlements, divestitures, impairment, etc.). Adjusted EBITDA is a measure of our ability to maintain and continue to invest in our operations and provide shareholder returns. We use adjusted EBITDA in assessing the effectiveness of our business strategies, evaluating and pricing potential acquisitions and as a factor in making incentive compensation decisions. In addition to its use by management, we also believe adjusted EBITDA is a measure widely used by securities analysts, investors and others to evaluate financial performance of our company relative to other Tier 1 automotive suppliers. Adjusted EBITDA should not be considered a substitute for earnings (loss) before income taxes, net income (loss) or other results reported in accordance with GAAP. Adjusted EBITDA may not be comparable to similarly titled measures reported by other companies. Expected Off-Highway adjusted EBITDA is EBITDA for the Off-Highway segment adjusted for excluded operations and certain corporate costs.

    We have not provided a reconciliation of our Off-Highway adjusted EBITDA to the most comparable GAAP measure of net income (loss). Providing expected net income (loss) is potentially misleading and not practical given the difficulty of projecting event driven transactional and other non-core operating items that are included in net income (loss), including restructuring actions, asset impairments and certain income tax adjustments. See our most recent Annual Report on Form 10-K, subsequent Quarterly Reports on Form 10-Q and Current Reports on Form 8-K that include reconciliations with the most comparable GAAP measures that are indicative of the reconciliations that would be prepared upon completion of the period covered by the expected non-GAAP measure.

    Forward-Looking Statements

    Certain statements and projections contained in this communication are, by their nature, forward-looking within the meaning of the Private Securities Litigation Reform Act of 1995. These forward-looking statements are based on Dana’s current expectations, estimates, and projections about Dana’s industry and business, management’s beliefs, and certain assumptions made by us, all of which are subject to change. Forward-looking statements can often be identified by words such as “anticipates,” “expects,” “intends,” “plans,” “predicts,” “believes,” “seeks,” “estimates,” “may,” “will,” “should,” “would,” “could,” “potential,” “continue,” “ongoing,” and similar expressions, and variations or negatives of these words. Forward-looking statements include, among other things, statements about the potential benefits of the transaction; the expected net cash proceeds from the transaction and plans to repay debt and return capital to shareholders; the prospective performance and outlook of Dana’s business, performance and opportunities following the completion of the transaction; as well as any assumptions underlying any of the foregoing. These forward-looking statements are not guarantees of future results and are subject to risks, uncertainties and assumptions that could cause Dana’s actual results to differ materially and adversely from those expressed in any forward-looking statement. Such risks and uncertainties include, without limitation, risks associated with the transaction, such as that the expected benefits of the transaction will not occur; risks related to future opportunities and plans for Dana, including uncertainty regarding the expected financial performance and results of Dana following completion of the transaction; disruption from the proposed transaction, making it more difficult to conduct business as usual or maintain relationships with customers, employees, or suppliers; and the possibility that if Dana does not achieve the perceived benefits of the transaction as rapidly or to the extent anticipated by financial analysts or investors, the market price of Dana’s shares could decline, as well as other risks related to Dana’s business. Dana’s Annual Report on Form 10-K, subsequent Quarterly Reports on Form 10-Q, recent Current Reports on Form 8-K, and other Securities and Exchange Commission filings discuss additional important risk factors that could affect Dana’s business, results of operations and financial condition. The forward-looking statements in this communication speak only as of this date. Dana does not undertake any obligation to revise or update publicly any forward-looking statement for any reason.

    About Dana Incorporated

    Dana is a leader in the design and manufacture of highly efficient propulsion and energy-management solutions that power vehicles and machines in all mobility markets across the globe.  The company is shaping sustainable progress through its conventional and clean-energy solutions that support nearly every vehicle manufacturer with drive and motion systems; electrodynamic technologies, including software and controls; and thermal, sealing, and digital solutions.

    Based in Maumee, Ohio, USA, the company reported sales of approximately $7.7 billion in 2024 with 28,000 people in 22 countries across six continents.  With a history dating to 1904, Dana was named among the “World’s Most Ethical Companies” for 2025 by Ethisphere and as one of “America’s Most Responsible Companies 2025” by Newsweek.  The company is driven by a high-performance culture that focuses on valuing others, inspiring innovation, growing responsibly, and winning together, earning it global recognition as a top employer.  Learn more at dana.com.

    SOURCE Dana Incorporated


    Craig Barber, Sr. Director – Investor Relations & Corporate Communications, Dana Incorporated, +1-419-887-5166, craig.barber@dana.com

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  • Oil prices drop after biggest annual loss since 2020 – Reuters

    1. Oil prices drop after biggest annual loss since 2020  Reuters
    2. Oil prices drop after biggest annual loss since 2020 By Reuters  Investing.com
    3. Oil prices set for biggest annual drop since 2020  Business Recorder
    4. Oil News: Oil Outlook Mixed as Geopolitical Risks Battle Inventory Oversupply  FXEmpire
    5. Oil ticks higher as OPEC+ holds the line and Venezuela risks stay in play  equiti.com

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  • 2025 FDA approvals

    2025 FDA approvals

    Drug developers secured approvals for 46 new therapeutic agents from the FDA’s Center for Drug Evaluation and Research (CDER) in 2025. This cohort brings the 5-year average down a touch, to 48 new drugs per year (Fig. 1, Table 1). Approvals are still well above the historic average, of 36 new drugs per year since 1993.

    Fig. 1 | Novel FDA approvals since 1993. Annual numbers of new molecular entities (NMEs) and biologics license applications (BLAs) approved by the FDA’s Center for Drug Evaluation and Research (CDER). See Table 1 for new approvals in 2025. Products approved by the Center for Biologics Evaluation and Research (CBER), including vaccines and gene therapies, are not included in this drug count (Table 2). Source: FDA.

    Cancer remains the most common therapeutic area for newly approved drugs (Fig. 2). 16 (35%) of CDER’s newly approved drugs were for cancer, up from a rolling 5-year average of 29%. The other most active areas were cardiology, with 5 (11%) new approvals, and allergy and inflammatory diseases, with 4 (9%) new approvals.

    Fig. 2 | CDER approvals by therapeutic areas. Indications that span multiple disease areas are classified under only one, based on which FDA office and division reviewed the approval application. Source: Nature Reviews Drug Discovery, FDA.

    Drug developers continue to advance a diverse array of modalities, including a first adnectin-based biologic therapy (Fig. 3).

    Fig. 3 | CDER approvals by modality. Small molecules, including peptides of up to 40 amino acids in length, and oligonucleotides are approved as new molecular entities (NMEs). Protein-based candidates are approved through biologics license applications (BLAs). ADC, antibody–drug conjugate; mAb, monoclonal antibody; siRNA, small interfering RNA. Source: Nature Reviews Drug Discovery.

    It was also the biggest year yet for kinase inhibitors, which accounted for around one third of the newly approved small molecules. Novartis’s remibrutinib (Rhapsido) became the 100th kinase inhibitor to secure FDA approval, showcasing the continued expansion of this type of drug beyond oncology. “The area is not played out yet,” University of Dundee’s Philip Cohen told Nature Reviews Drug Discovery.

    The FDA has not yet released its breakdown of these new approvals by their regulatory designations.

    CBER approved 8 notable new products (Table 2), including a first gene therapy from a non-profit organization.

    The average peak sales for the novel CDER and CBER approvals is around US$1.2 billion, shows an upcoming analysis by Boston Consulting Group. The median is around $600 million.

    2025 was, however, a tumultuous year for the FDA, with dramatic staffing and policy changes since President Donald Trump appointed Robert F. Kennedy Jr. to lead the US Department of Health and Human Services. In the first 9 months of the year, more than 18% of the FDA’s CDER and CBER employees were fired or quit. CDER had five directors over the course of the year.

    The agency nevertheless introduced new approval programmes and pathways. It launched its FDA Commissioner’s National Priority Voucher (CNPV) pilot programme, which aims to cut review timelines from the usual 10–12 months down to 2 months. The controversial programme risks politicizing the drug review process and eroding regulatory standards, some FDA staffers and watchdogs have warned. The FDA also proposed a plausible mechanism pathway for situations where randomized trials are not feasible, including for bespoke n-of-1 therapies. And it announced plans to phase out animal toxicity testing.

    More changes could be coming. The FDA typically requires drug developers to run two pivotal trials to secure full approvals for their products, but the agency is reportedly moving towards making the default requirement a single trial.

    The cancer crowd

    Cancer continues to dominate industry’s pipeline. But while oncology drugs contribute the bulk of the new approvals, they account for just two multi-blockbuster drugs, with earning potential of over $2 billion annually according to Evaluate forecasts.

    The top-selling new approval is likely to be Merck & Co.’s subcutaneous formulation of pembrolizumab plus berahyaluronidase alfa (Keytruda Qlex) for various solid tumours.

    Pembrolizumab, a landmark PD1 inhibitor that was first approved in 2014, unleashes immune cells on cancerous cells. Berahyaluronidase alfa is an endoglycosidase enzyme that facilitates the injection of the antibody, temporarily breaking down the subcutaneous extracellular matrix to improve the antibody’s permeation and absorption. Drug developers have been using the hyaluronidase enzyme as a spreading agent for decades, but this is the first green light for this engineered variant of the protein. Merck’s combination as a result counts as a novel approval.

    Pembrolizumab is forecasted to pull in around $32 billion in 2025, making it the top-selling cancer drug (and third-highest selling drug overall). Analysts at Evaluate expect the subcutaneous product to contribute $9.3 billion in peak sales.

    Akeso Biopharma secured an approval for its PD1 blocker penpulimab (Penpulimab), bringing the number of available PD1/PDL1 antibodies up to 12.

    2025 also saw the approval of two new antibody–drug conjugates (ADCs), a modality made up of tissue-selective antibodies fused to potent cell-killing drugs. Daiichi Sankyo’s TROP2-targeted ADC datopotamab deruxtecan (Datroway) secured a thumbs up for the treatment of hormone receptor-positive, HER2-negative breast cancer following endocrine-based therapy and chemotherapy.

    Evaluate forecasts peak sales of $5.4 billion for the ADC, assuming a possible additional approval in a bigger non-small-cell lung cancer (NSCLC) cohort. Gilead and Immunomedics’s first-in-class TROP2-targeted ADC sacituzumab govitecan (Trodelvy), first granted accelerated approval in 2020, is on track to earn $1.4 billion in 2025.

    The FDA also granted an approval to AbbVie’s first-in-class c-Met-targeted ADC, elisotuzumab vedotin (Emrelis). The microtubule-inhibitor-loaded antibody is approved for non-squamous NSCLC with high c-Met protein overexpression.

    Regeneron’s linvoseltamab (Lynozyfic) adds a new bispecific T cell engager to the fold. Linvoseltamab binds BCMA on B cells and CD3 on T cells to drive B cell depletion for the treatment of multiple myeloma. It is the third BCMA × CD3 bispecific to market, and the 10th bispecific T cell engager.

    On the kinase inhibitor front, the FDA granted a rare novel–novel combination approval for two previously experimental agents. Verastem’s avutometinib plus defactinib (Avmapki Fakzynja Co-Pack) combines a MEK inhibitor and a FAK inhibitor for the treatment of KRAS-mutated recurrent low-grade serous ovarian cancer.

    Defactinib is the first FAK inhibitor to secure a green light. The agency has approved several other MEK inhibitors. The FDA has counted these two novel kinase inhibitors as a single new drug approval.

    “More people should be open to novel–novel combinations,” Verastem CSO Jonathon Pachter told Nature Reviews Drug Discovery.

    Jazz Pharmaceuticals’ first-in-class activator of mitochondrial caseinolytic protease P (ClpP) dordaviprone (Modeyso) secured an accelerated approval for patients with diffuse midline gliomas that harbour H3 K27M mutations who have progressive disease following prior therapy. ClpP chews up mitochondrial proteins, and in this cancer its activation is hypothesized to induce the integrated stress response, apoptosis and the release of metabolites that reverse the proliferative effects of H3 K27M mutations.

    First-in-class, with big unmet needs

    Non-oncology CDER approvals also added two mega-blockbuster contenders with first-in-class mechanisms for new disease indications.

    Insmed’s brensocatib (Brinsupri) is the first DPP1 inhibitor to market for bronchiectasis, showcasing the potential for neutrophil-targeting drugs in inflammatory lung diseases.

    Bronchiectasis is a chronic disease of the lungs that results in excessive mucus production, persistent cough and widening of the airways. It affects 350,000–500,000 people in the USA, and until this year the only treatment options were physical therapy to promote mucus clearance and antibiotics to tackle associated respiratory infections. The disease has been linked with overactive neutrophils, innate immune cells that release antimicrobial peptides called neutrophil serine proteases (NSPs) to kill invading pathogens. The DPP1 inhibitor brensocatib dampens NSP production, disarming these inflammatory proteases while sparing other neutrophil effector functions.

    “It’s a hopeful time — to be able to tell patients that there are things on the horizon that may really help them,” Doreen Addrizzo-Harris, a pulmonologist at NYU Langone Health who was involved in the clinical trials of brensocatib, told Nature Reviews Drug Discovery.

    Analysts forecast peak sales of $6.3 billion for the drug, assuming further approvals in other neutrophil-mediated diseases. In December the company discontinued development in chronic rhinosinusitis, however, after the drug failed to reduce nasal inflammation in that setting.

    Vertex’s NaV1.8 sodium channel inhibitor suzetrigine (Journavx) provides a much-needed non-opioid painkiller option for acute pain. Drug developers have been working to inhibit NaV sodium channels since the 2000s, when researchers found that gain-of-function mutations in the NaV1.7 channel in humans can lead to persistent pain problems and that loss-of-function mutations can prevent the perception of pain. NaV1.7 inhibitors have disappointed in the clinic, but Vertex persevered with the related NaV1.8 channel.

    “This is the first medicine that is specifically designed to only affect pain,” Paul Negulescu, senior vice president of research at Vertex, told Nature Reviews Drug Discovery. “Suzetrigine is the beginning, but it’s not the end. It’s a great first step in this new class of medications.”

    Analysts forecast peak sales of $3.7 billion for the drug, citing the need for non-addictive painkillers and its broader opportunity in chronic pain indications. But there are headwinds. Suzetrigine was approved on the basis of its non-inferiority to acetaminophen–opioid combinations in acute pain following some surgical procedures, but its comparability in other acute pain settings remains unclear. It also has a much higher price tag than decades-old agents that are available as generics. And the drug’s efficacy in chronic pain settings remains to be seen. Phase III development of suzetrigine in painful diabetic peripheral neuropathy is ongoing, but the drug failed in a trial in lumbosacral radiculopathy.

    Vertex discontinued its development of the follow on Nav1.8 inhibitor VX-993 for acute pain after that agent failed in a phase II trial later in the year.

    Other first-in-class agents also provide important additions to the pharmaceutical tool box, but come with lower sales expectations.

    GSK’s gepotidacin (Blujepa) for example provides a much needed new oral antibiotic option. Gepotidacin, like quinolone-based antibiotics that have been in use since the 1960s, inhibits bacterial type IIA topoisomerases. But it uses a different scaffold and binds the target at a different site, giving it a first-in-class antibiotic moniker. The FDA first approved it in May for uncomplicated urinary tract infections (uUTIs) in female adults and paediatric patients 12 years of age and older. In December the FDA approved it for gonorrhea.

    Innoviva Specialty Therapeutics’ zoliflodacin (Nozolvence), another structurally distinct inhibitor of bacterial type II topoisomerases, also secured an FDA approval for gonorrhea. The phase III trials of zoliflodacin were funded and carried out by Global Antibiotic Research & Development Partnership (GARDP), a publicly funded not-for-profit that plans to make the drug available and accessible globally. Innoviva acquired the drug by buying Entasis Therapeutics, a spin-out of AstraZeneca.

    Proven targets, new indications

    Kinase inhibitors continue to push into inflammatory and immune diseases, led by agents that act on BTK. BTK inhibitors were first approved for the treatment of blood cancers based on their ability to kill malignant B cells, but they can also be used to modulate the activity of these immune cells. This year Sanofi snagged a first approval for its rilzabrutinib (Wayrilz) for immune thrombocytopenia, an autoimmune blood disorder. Novartis got a green light for its remibrutinib (Rhapsido) for chronic spontaneous urticaria, also known as chronic hives.

    Analysts forecast peak sales of $2.1 billion for remibrutinib, which is still in clinical development for multiple sclerosis, myasthenia gravis, hidradenitis suppurativa and food allergies. They expect peak sales of $900 million for Sanofi’s rilzabrutinib.

    The agency by contrast rejected Sanofi’s BTK inhibitor tolebrutinib for the treatment of multiple sclerosis.

    Boehringer Ingelheim’s nerandomilast (Jascayd) became the first PDE4 inhibitor for the treatment of idiopathic pulmonary fibrosis (IPF).

    Anti-inflammatory and immunomodulatory PDE4 inhibitors have been approved for other indications, including chronic obstructive pulmonary disease and psoriasis. Boehringer now adds a nod for IPF, a chronic and fatal lung disease that affects up to 3.6 million people worldwide. Nerandomilast preferentially inhibits the PDE4B family member to dampen profibrotic processes and inflammation in the lung.

    It is the first new drug to market for IPF in over 10 years, following on from the 2014 FDA approvals for Boehringer’s multikinase inhibitor nintedanib (Ofev) and the antifibrotic pirfenidone (Esbriet), now marketed by Legacy Pharma.

    A new modality

    LIB Therapeutics scored a first approval for an adnectin-based therapy, with its PCSK9-blocking lerodalcibep (Lerochol).

    Adnectins are biologic agents that are built with fibronectin type III domains, scaffold proteins that facilitate cell–cell interactions and that can bind various ligands. Researchers have for decades held that adnectins can serve as antibody mimetics, offering exquisite selectivity for extracellular and cell-surface targets while offering smaller, simpler and more stable structures than conventional monoclonal antibodies.

    LIB adopted this technology to develop the latest blocker of PCSK9, a well-validated lipid-lowering target. PCSK9-targeted antibodies have now been on the market for 10 years. Uptake of these agents has yet to live up to once-high hopes, in part because of the costs of the antibodies and the inconvenience of their subcutaneous dosing compared with generic lipid-lowering pills. LIB hopes that its lerodalcibep — a self-administered, once-monthly subcutaneous injection with extended room-temperature stability — will have a convenience edge.

    Oral small-molecule PCSK9 inhibitors could be coming soon, however. Merck & Co. is expected to file its once-daily enlicitide for FDA approval in April. The FDA has granted the drug a CNPV, and so it could be due for a speedy review. If approved, the company says it plans to make the drug “broadly available as an affordable option for American patients”.

    Cluster analysis

    Patients with hereditary angioedema (HAE) meanwhile gained access to three new drugs.

    HAE is a rare genetic swelling disorder that is caused by deficiencies or dysfunction of the C1 inhibitor, a protein that regulates the activity of multiple serine proteases. The lack of C1 inhibitor results in increased activity of complement proteases, plasma kallikrein and the coagulation proteases factor XIa, XIIa and XIIf.

    CSL’s Behring’s newly approved prophylactic antibody garadacimab (Andembry) takes aim at activated factor XII to prevent disease attacks. Ionis’s antisense oligonucleotide donidalorsen (Dawnzera) targets prekallikrein to also prevent disease attacks. Kalvista’s small-molecule plasma kallikrein inhibitor sebetralstat (Ekterly) is by contrast approved for the treatment of acute attacks.

    These new drugs step into a crowded HAE market, however, and are taking on established preventative and acute options that act at various nodes in the pathologic pathway.

    Patients with primary immunoglobulin A nephropathy (IgAN) at risk for disease progression gained access to two new therapies. IgAN is an immune-mediated kidney disease, in which immunoglobulin A (IgA)-containing immune complexes accumulate in the kidney. It causes progressive loss of kidney function, and can lead to kidney failure. Otsuka’s sibeprenlimab (Voyxact) is a first-in-class APRIL-targeted antibody for the disease, dampening IgA production to reduce proteinuria in patients. Novartis’s newly approved atrasentan (Vanrafia) is an endothelin receptor antagonist, lowering glomerular pressure and inflammation in the kidneys.

    Vera Therapeutic’s atacicept, a BLyS and APRIL inhibiting fusion protein, is under FDA review for IgAN too, with a decision due in 2026.

    Non-profit gene therapy

    CBER continues to notch up additional gene therapy approvals. This includes a first approval for a non-profit organization, with Fondazione Telethon ETS’s regulatory win for etuvetidigene autotemcel (Waskyra) for the treatment of Wiskott–Aldrich syndrome (WAS).

    WAS is a rare genetic disease, caused by mutations in the WAS gene that lead to abnormal platelet formation. Etuvetidigene autotemcel is an ex vivo gene therapy that uses a lentiviral vector to add the WAS gene sequence to patient-derived haematopoietic stem cells, restoring platelet function. The gene therapy originated from a 2010 partnership between the Fondazione Telethon non-profit, San Raffaele Telethon Institute for Gene Therapy and GSK, and has shown durable efficacy. When GSK struggled with the commercialization of gene therapies, it licensed the experimental etuvetidigene autotemcel to Orchard Therapeutics. Orchard licensed it to Fondazione Telethon in 2022.

    Fondazione Telethon will work with Orphan Therapeutics Accelerator, a non-profit biotech, to provide patients in the US with access to the gene therapy. The partners expect to treat fewer than 10 patients per year with the gene therapy in the US. Pricing negotiations are ongoing. The gene-therapy community is watching closely to see how the non-profit model will work.

    “As an academic scientist, I would say I underestimated the burden of filing and maintaining a drug on the market,” Alessandro Aiuti, deputy director of clinical research at San Raffaele Telethon Institute for Gene Therapy, told Nature Reviews Drug Discovery. Aiuti helped to steward the gene therapy to approval.

    The FDA also approved Abeona Therapeutics’ prademagene zamikeracel (Zevaskyn), a first cell-sheet-based gene therapy for a severe skin disease. Prademagene zamikeracel is made from skin cells that have been biopsied from patients, transduced ex vivo to carry a gene that encodes type VII collagen, and then grown into credit-card sized sheets of cells that are grafted on to wounds. It is approved for the treatment of recessive dystrophic epidermolysis bullosa (DEB), a rare genetic skin disease caused by mutations in the gene that encodes type VII collagen. Patients with the disease have fragile skin that tears and blisters easily.

    The FDA in 2023 approved Krystal Biotech’s beremagene geperpavec (Vyjuvek), a topical, redosable type VII collagen gene therapy that speeds up wound healing in patients with DEB.

    Precigen’s zopapogene imadenovec (Papzimeos) is a first immunotherapy for a rare viral disease called recurrent respiratory papillomatosis (RRP). RRP is caused by human papilloma virus (HPV) infection and results in non-cancerous growths in the airway. Zopapogene imadenovec consists of a non-replicating gorilla adenovirus vector loaded up with genes from HPV 6 and 11, triggering a T cell response against HPV to clear these growths.

    CBER also granted full approval to two new COVID-19 vaccines. Moderna’s mNexspike, a next-generation mRNA vaccine, uses one-fifth the amount of mRNA per dose compared with the company’s earlier Spikevax and codes for only parts of the spike protein. Analysts forecast sales of over $3.2 billion for the vaccine.

    Rejection letter transparency

    In another policy change at the FDA, the agency started releasing partially redacted complete response letters for rejected drugs. As of 31 December, it listed 43 applications that were rejected in 2025, including new drugs (Table 3), supplemental filings, generics and biosimilars filed with either CDER or CBER.

    Scholar Rock received a complete response letter for its apitegromab, an anti-promyostatin antibody. Scholar Rock has developed the muscle-building antibody for spinal muscular atrophy, but the agency rejected it due to issues at a third-party fill-finish facility. Scholar Rock plans to refile the drug once the manufacturing issues are resolved.

    Regeneron received a second complete response letter for its odronextamab, a CD20 × CD3 targeted bispecific for follicular lymphoma. This rejection too was due in part to issues at the same fill-finish facility.

    Stealth Bio received a complete response letter in May for its elampretide, a mitochondrial cardiolipin binder for the treatment of Barth syndrome. The FDA said at the time that the submitted dossier did not show sufficient evidence of effectiveness for either full or accelerated approval. Stealth resubmitted a new dossier months later, seeking approval on the basis of a different surrogate endpoint, and secured approval in September.

    The agency also rejected Replimune’s vusolimogene oderparepvec, which could have become the first new oncolytic virus to market since the 2015 approval of Amgen’s talimogene laherparepvec (Imlygic). A trial of vusolimogene oderparepvec in combination with the PD1 blocker nivolumab in patients with melanoma showed a numerically higher response rate than historical control rates, but the FDA’s complete response letter notes that the heterogeneity of the patient population in this trial precludes interpretation of these results. The trial also did not isolate the effects of the therapeutic virus from those of the PD1 blocker.

    Replimune has since resubmitted vusolimogene oderparepvec for approval. A decision is due in April.

    A new year

    Multiple novel drugs are up for potential first approvals next year (Table 4).

    Arvinas and Pfizer’s oestrogen receptor (ER)-targeted vepdegestrant could become the first targeted-protein degrader to secure an FDA approval. The FDA has approved several selective oestrogen receptor degraders (SERDs), which induce conformation changes in the ER to drive degradation. Vepdegestrant is a two-armed small molecule PROTAC that binds the receptor with one arm and a piece of the proteasomal machinery with the other to induce degradation. The drug has however struggled in trials to differentiate itself from approved and investigational SERDs, and Arvinas and Pfizer are looking to out license the first-in-modality agent.

    If approved vepdegestrant would nevertheless validate targeted degraders. Drug developers expect that the modality and related molecular glue degraders could yet unlock otherwise undruggable targets.

    Denali Therapeutics expects an approval for its tividenofusp alfa, an enzyme replacement therapy for Hunter syndrome. Takeda’s idursulfase (Elaprase), an iduronate-2-sulfatase (IDS) enzyme replacement therapy, has been approved since 2006 for this disease but has poor penetration into the brain and cannot address the neurological symptoms associated with the disease. Tividenofusp alfa consists of the IDS protein fused to an Fc fragment that binds the transferrin receptor, shuttling the biologic into the CNS.

    Regenxbio could also get an approval for its clemidsogene lanparvovec, a gene therapy that is injected into the CNS for the treatment of Hunter syndrome.

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  • Chinese tech stocks charged into 2026 with an AI chip IPO surge and more listings lined up

    Chinese tech stocks charged into 2026 with an AI chip IPO surge and more listings lined up

    China’s AI stock rally is reversing a bruising period for tech after regulatory and economic headwinds.Getty Images; Alyssa Powell/BI
    • AI chip designer Shanghai Biren’s blockbuster Hong Kong debut adds momentum to China’s AI tech rally in 2026.

    • Chinese AI and chip stocks have surged since DeepSeek-R1’s breakout last year.

    • More AI-linked IPOs are coming, with Baidu’s chip unit lining up in Hong Kong.

    Chinese tech stocks kicked off 2026 by testing how far their AI-fueled rally can run.

    Shares of Shanghai Biren Technology, an AI chip designer, surged nearly 120% on the Hong Kong Stock Exchange by midday on Friday after the company raised 5.58 billion Hong Kong dollars, or $717 million, in an initial public offering.

    The stock opened at 35.70 Hong Kong dollars, well above its IPO price of 19.60 Hong Kong dollars.

    That appetite was reflected across the offering, with the retail portion subscribed more than 2,300 times, according to exchange filings, underscoring intense interest in China’s homegrown AI hardware sector.

    The enthusiasm has been building more broadly. Chinese AI and semiconductor stocks have rallied since the breakout of the China-made DeepSeek-R1 AI model in January last year, which helped push the Hang Seng Tech Index 23% higher in 2025. The index jumped by as much as 3.9% on Friday.

    Washington’s tightening export controls on advanced Nvidia chips have also fueled the boom by accelerating demand for domestic alternatives.

    “Nvidia’s once-dominant position in China’s AI chip market has effectively evaporated in 2025, marking a seismic shift in the global intelligent-computing landscape,” wrote Andrei Zakharov, an analyst who publishes on Smartkarma, in a note last week.

    Shanghai Biren’s stunning stock market debut underscored China’s AI rally, which reversed a few bruising years for the country’s tech sector amid a regulatory crackdown and broad economic challenges.

    Following the DeepSeek-R1 breakout, startups such as Cambricon, Moore Threads, and Metax have drawn billions of dollars in funding as they race to supply chips for data centers, large language models, and industrial AI applications.

    That surge in capital is also translating into personal fortunes, with China’s AI chip boom minting billionaires at breakneck speed even as the broader economy continues to sputter amid a long-drawn property crisis.

    Shanghai Biren’s blockbuster debut is expected to be followed by more fresh supply, with Hong Kong emerging as the key venue for that fundraising drive.

    Baidu, a Chinese big tech firm, said on Friday that its artificial-intelligence chip unit has confidentially filed for a Hong Kong listing.

    At least 25 companies made their market debuts in Hong Kong last month, marking the busiest month for IPOs since November 2019, according to Bloomberg data. About half of those listings were technology firms.

    More AI-related Chinese tech listings are expected this month. They include startup MiniMax Group and Knowledge Atlas Technology, also known as Zhipu AI, which are expected to make their debut next week.

    Read the original article on Business Insider

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  • Jesmond Metro platform to be closed until mid-January

    Jesmond Metro platform to be closed until mid-January

    Passengers travelling north who need to get off at Jesmond are being advised to continue to West Jesmond before travelling back on a southbound service.

    Those who want to board at Jesmond and head towards Gosforth are advised to travel to Haymarket station and get on a northbound train there.

    Nexus said there will be additional staff at West Jesmond during the start of the first school week to assist with travel.

    Ben Brooks, head of engineering at Nexus, told the Local Democracy Reporting Service the temporary closure “is a precautionary step to keep everyone safe”.

    “We are working closely with Stadler to investigate this isolated issue further.

    “The roll out of the new Metro fleet will continue.”

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  • Johnson & Johnson Announces Quarterly Dividend for First Quarter 2026

    New Brunswick, NJ (January 2, 2026) – Johnson & Johnson (NYSE: JNJ) today announced that its Board of Directors has declared a cash dividend for the first quarter of 2026 of $1.30 per share on the company’s common stock. The dividend is payable on March 10, 2026 to shareholders of record at the close of business on February 24, 2026. The ex-dividend date is February 24, 2026.

    About Johnson & Johnson
    At Johnson & Johnson, we believe health is everything. Our strength in healthcare innovation empowers us to build a world where complex diseases are prevented, treated, and cured, where treatments are smarter and less invasive, and solutions are personal. Through our expertise in Innovative Medicine and MedTech, we are uniquely positioned to innovate across the full spectrum of healthcare solutions today to deliver the breakthroughs of tomorrow, and profoundly impact health for humanity. Learn more at https://www.jnj.com/. 


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  • Computer scientist Yann LeCun: ‘Intelligence really is about learning’ – Financial Times

    Computer scientist Yann LeCun: ‘Intelligence really is about learning’ – Financial Times

    1. Computer scientist Yann LeCun: ‘Intelligence really is about learning’  Financial Times
    2. Meta “Fudged” Llama 4 Benchmarks “A Little Bit”, Says Yann LeCun  OfficeChai
    3. Yann LeCun calls Alexandr Wang ‘inexperienced’ and predicts more Meta AI employee departures  Business Insider
    4. Meta’s most famous employee Yann LeCun breaks silence on why he left Mark Zuckerberg’s company  Times of India
    5. How Meta’s ‘highest-paid’ employee made the company’s chief scientist do what he told Elon Musk he will ‘never do’  Times of India

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  • Calumet to Attend Goldman Sachs Energy, Clean Tech and Utilities Conference

    INDIANAPOLIS, Jan. 2, 2026 /PRNewswire/ — Calumet, Inc. (NASDAQ: CLMT) (“Calumet”) announced today that it plans to attend the Goldman Sachs Energy, Clean Tech and Utilities Conference on Tuesday, January 6th and will hold one-on-one investor meetings throughout the day.

    About Calumet

    Calumet, Inc. (NASDAQ: CLMT) manufactures, formulates, and markets a diversified slate of specialty branded products and renewable fuels to customers across a broad range of consumer-facing and industrial markets. Calumet is headquartered in Indianapolis, Indiana and operates twelve facilities throughout North America.

    SOURCE Calumet, Inc.

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  • Wiedenheft, B., Sternberg, S. H. & Doudna, J. A. RNA-guided genetic silencing systems in bacteria and archaea. Nature 482, 331–338 (2012).

    Article 
    PubMed 

    Google Scholar 

  • Barrangou, R. et al. CRISPR provides acquired resistance against viruses in prokaryotes. Science 315, 1709–1712 (2007).

    Article 
    PubMed 

    Google Scholar 

  • Garneau, J. E. et al. The CRISPR–Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature 468, 67–71 (2010).

    Article 
    PubMed 

    Google Scholar 

  • Marraffini, L. A. CRISPR–Cas immunity in prokaryotes. Nature 526, 55–61 (2015).

    Article 
    PubMed 

    Google Scholar 

  • Zhang, S. et al. Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity. Nature 630, 484–492 (2024).

    Article 
    PubMed 

    Google Scholar 

  • Rauch, B. J. et al. Inhibition of CRISPR–Cas9 with bacteriophage proteins. Cell 168, 150–158.e10 (2017).

    Article 
    PubMed 

    Google Scholar 

  • Camara-Wilpert, S. et al. Bacteriophages suppress CRISPR–Cas immunity using RNA-based anti-CRISPRs. Nature 623, 601–607 (2023).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Marino, N. D. et al. Discovery of widespread type I and type V CRISPR–Cas inhibitors. Science 362, 240–242 (2018).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Bondy-Denomy, J. et al. Multiple mechanisms for CRISPR–Cas inhibition by anti-CRISPR proteins. Nature 526, 136–139 (2015).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Jia, N. & Patel, D. J. Structure-based functional mechanisms and biotechnology applications of anti-CRISPR proteins. Nat. Rev. Mol. Cell Biol. 22, 563–579 (2021).

    Article 
    PubMed 

    Google Scholar 

  • Shu, X. et al. CRISPR-repressed toxin–antitoxin provides herd immunity against anti-CRISPR elements. Nat. Chem. Biol. 21, 337–347 (2025).

    Article 
    PubMed 

    Google Scholar 

  • Makarova, K. S. et al. Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants. Nat. Rev. Microbiol. 18, 67–83 (2020).

    Article 
    PubMed 

    Google Scholar 

  • Shmakov, S. et al. Diversity and evolution of class 2 CRISPR–Cas systems. Nat. Rev. Microbiol. 15, 169–182 (2017).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Wang, J. Y., Pausch, P. & Doudna, J. A. Structural biology of CRISPR–Cas immunity and genome editing enzymes. Nat. Rev. Microbiol. 20, 641–656 (2022).

    Article 
    PubMed 

    Google Scholar 

  • Strecker, J. et al. RNA-guided DNA insertion with CRISPR-associated transposases. Science 365, 48–53 (2019).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Wu, Z. et al. Structure and engineering of miniature Acidibacillus sulfuroxidans Cas12f1. Nat. Catal. 6, 695–709 (2023).

    Article 

    Google Scholar 

  • Takeda, S. N. et al. Structure of the miniature type V-F CRISPR–Cas effector enzyme. Mol. Cell 81, 558–570.e3 (2021).

    Article 
    PubMed 

    Google Scholar 

  • Wu, W. Y. et al. The miniature CRISPR–Cas12m effector binds DNA to block transcription. Mol. Cell 82, 4487–4502.e7 (2022).

    Article 
    PubMed 

    Google Scholar 

  • Yan, W. X. et al. Functionally diverse type V CRISPR–Cas systems. Science 363, 88–91 (2019).

    Article 
    PubMed 

    Google Scholar 

  • Dmytrenko, O. et al. Cas12a2 elicits abortive infection through RNA-triggered destruction of dsDNA. Nature 613, 588–594 (2023).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Guo, J. et al. VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses. Microbiome 9, 37 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Camargo, A. P. et al. Identification of mobile genetic elements with geNomad. Nat. Biotechnol. 42, 1303–1312 (2024).

    Article 
    PubMed 

    Google Scholar 

  • Zhang, R. et al. SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts. Bioinformatics 37, 3364–3366 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Wu, Z. et al. Programmed genome editing by a miniature CRISPR–Cas12f nuclease. Nat. Chem. Biol. 17, 1132–1138 (2021).

    Article 
    PubMed 

    Google Scholar 

  • Holmgren, A. Thioredoxin. Annu. Rev. Biochem. 54, 237–271 (1985).

    Article 
    PubMed 

    Google Scholar 

  • Martin, J. L. Thioredoxin—a fold for all reasons. Structure 3, 245–250 (1995).

    Article 
    PubMed 

    Google Scholar 

  • Zeller, T. & Klug, G. Thioredoxins in bacteria: functions in oxidative stress response and regulation of thioredoxin genes. Naturwissenschaften 93, 259–266 (2006).

    Article 
    PubMed 

    Google Scholar 

  • Chartron, J., Shiau, C., Stout, C. D. & Carroll, K. S. 3′-Phosphoadenosine-5′-phosphosulfate reductase in complex with thioredoxin: a structural snapshot in the catalytic cycle. Biochemistry 46, 3942–3951 (2007).

    Article 
    PubMed 

    Google Scholar 

  • Hwang, J. et al. The structural basis for the negative regulation of thioredoxin by thioredoxin-interacting protein. Nat. Commun. 5, 2958 (2014).

    Article 
    PubMed 

    Google Scholar 

  • Zhang, Z. et al. Structural basis for thioredoxin-mediated suppression of NLRP1 inflammasome. Nature 622, 188–194 (2023).

    Article 
    PubMed 

    Google Scholar 

  • Ball, D. P. et al. Oxidized thioredoxin-1 restrains the NLRP1 inflammasome. Sci. Immunol. 7, eabm7200 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Gao, Y. et al. Structures and operating principles of the replisome. Science 363, eaav7003 (2019).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Tabor, S., Huber, H. E. & Richardson, C. C. Escherichia coli thioredoxin confers processivity on the DNA polymerase activity of the gene 5 protein of bacteriophage T7. J. Biol. Chem. 262, 16212–16223 (1987).

    Article 
    PubMed 

    Google Scholar 

  • Park, J.-U. et al. Structures of the holo CRISPR RNA-guided transposon integration complex. Nature 613, 775–782 (2023).

    Article 
    PubMed 

    Google Scholar 

  • Nakagawa, R. et al. Cryo-EM structure of the transposon-associated TnpB enzyme. Nature 616, 390–397 (2023).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Yamano, T. et al. Crystal structure of Cpf1 in complex with guide RNA and target DNA. Cell 165, 949–962 (2016).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Yang, H., Gao, P., Rajashankar, K. R. & Patel, D. J. PAM-dependent target DNA recognition and cleavage by C2c1 CRISPR–cas endonuclease. Cell 167, 1814–1828.e12 (2016).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Kurihara, N. et al. Structure of the type V-C CRISPR–Cas effector enzyme. Mol. Cell 82, 1865–1877.e4 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Tsuchida, C. A. et al. Chimeric CRISPR–CasX enzymes and guide RNAs for improved genome editing activity. Mol. Cell 82, 1199–1209.e6 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Hino, T. et al. An AsCas12f-based compact genome-editing tool derived by deep mutational scanning and structural analysis. Cell 186, 4920–4935.e23 (2023).

    Article 
    PubMed 

    Google Scholar 

  • Li, Z., Zhang, H., Xiao, R., Han, R. & Chang, L. Cryo-EM structure of the RNA-guided ribonuclease Cas12g. Nat. Chem. Biol. 17, 387–393 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Zhang, B. et al. Mechanistic insights into the R-loop formation and cleavage in CRISPR–Cas12i1. Nat. Commun. 12, 3476 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Pausch, P. et al. DNA interference states of the hypercompact CRISPR–CasΦ effector. Nat. Struct. Mol. Biol. 28, 652–661 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Sun, A. et al. The compact Casπ (Cas12l) ‘bracelet’ provides a unique structural platform for DNA manipulation. Cell Res. 33, 229–244 (2023).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Omura, S. N. et al. Mechanistic and evolutionary insights into a type V-M CRISPR–Cas effector enzyme. Nat. Struct. Mol. Biol. 30, 1172–1182 (2023).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Al-Shayeb, B. et al. Diverse virus-encoded CRISPR–Cas systems include streamlined genome editors. Cell 185, 4574–4586.e16 (2022).

    Article 
    PubMed 

    Google Scholar 

  • Duan, Z. et al. Structure and genome editing activity of the novel CRISPR–Cas12o1 effector. Cell Res. 35, 145–148 (2025).

    Article 
    PubMed 

    Google Scholar 

  • Sasnauskas, G. et al. TnpB structure reveals minimal functional core of Cas12 nuclease family. Nature 616, 384–389 (2023).

    Article 
    PubMed 

    Google Scholar 

  • Chamberlin, M. Isolation and characterization of prototrophic mutants of Escherichia coli unable to support the intracellular growth of T7. J. Virol. 14, 509–516 (1974).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Hamdan, S. M. et al. A unique loop in T7 DNA polymerase mediates the binding of helicase–primase, DNA binding protein, and processivity factor. Proc. Natl Acad. Sci. USA 102, 5096–5101 (2005).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Evans, R. et al. Protein complex prediction with AlphaFold-Multimer. Preprint at bioRxiv https://doi.org/10.1101/2021.10.04.463034 (2021).

  • Omidi, A., Møller, M. H., Malhis, N., Bui, J. M. & Gsponer, J. AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions. Proc. Natl Acad. Sci. USA 121, e2406407121 (2024).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Wilson, C. J., Choy, W.-Y. & Karttunen, M. AlphaFold2: a role for disordered protein/region prediction?. Int. J. Mol. Sci. 23, 4591 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Holehouse, A. S. & Kragelund, B. B. The molecular basis for cellular function of intrinsically disordered protein regions. Nat. Rev. Mol. Cell Biol. 25, 187–211 (2024).

    Article 
    PubMed 

    Google Scholar 

  • Bryant, P., Pozzati, G. & Elofsson, A. Improved prediction of protein-protein interactions using AlphaFold2. Nat. Commun. 13, 1265 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Tang, N. & Ji, Q. Miniature CRISPR–Cas12 systems: mechanisms, engineering, and genome editing applications. ACS Chem. Biol. 19, 1399–1408 (2024).

    Article 
    PubMed 

    Google Scholar 

  • Karvelis, T. et al. Transposon-associated TnpB is a programmable RNA-guided DNA endonuclease. Nature 599, 692–696 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Wu, W. Y., Adiego-Pérez, B. & Van Der Oost, J. Biology and applications of CRISPR–Cas12 and transposon-associated homologs. Nat. Biotechnol. 42, 1807–1821 (2024).

    Article 
    PubMed 

    Google Scholar 

  • Chen, W. et al. Cas12n nucleases, early evolutionary intermediates of type V CRISPR, comprise a distinct family of miniature genome editors. Mol. Cell 83, 2768–2780.e6 (2023).

    Article 
    PubMed 

    Google Scholar 

  • Xu, X. et al. Engineered miniature CRISPR–Cas system for mammalian genome regulation and editing. Mol. Cell 81, 4333–4345.e4 (2021).

    Article 
    PubMed 

    Google Scholar 

  • Kim, D. Y. et al. Efficient CRISPR editing with a hypercompact Cas12f1 and engineered guide RNAs delivered by adeno-associated virus. Nat. Biotechnol. 40, 94–102 (2022).

    Article 
    PubMed 

    Google Scholar 

  • Bland, C. et al. CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats. BMC Bioinformatics 8, 209 (2007).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Hyatt, D. et al. Prodigal: prokaryotic gene recognition and translation initiation site identification. BMC Bioinformatics 11, 119 (2010).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Pausch, P. et al. CRISPR–CasΦ from huge phages is a hypercompact genome editor. Science 369, 333–337 (2020).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Katoh, K. & Standley, D. M. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol. Biol. Evol. 30, 772–780 (2013).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Eddy, S. R. Accelerated profile HMM searches. PLoS Comput. Biol. 7, e1002195 (2011).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Steinegger, M. & Söding, J. MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets. Nat. Biotechnol. 35, 1026–1028 (2017).

    Article 
    PubMed 

    Google Scholar 

  • Jumper, J. et al. Highly accurate protein structure prediction with AlphaFold. Nature 596, 583–589 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Mirdita, M. et al. ColabFold: making protein folding accessible to all. Nat. Methods 19, 679–682 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Edgar, R. C. Muscle5: high-accuracy alignment ensembles enable unbiased assessments of sequence homology and phylogeny. Nat. Commun. 13, 6968 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Minh, B. Q. et al. IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Mol. Biol. Evol. 37, 1530–1534 (2020).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Letunic, I. & Bork, P. Interactive Tree of Life (iTOL) v6: recent updates to the phylogenetic tree display and annotation tool. Nucleic Acids Res. 52, W78–W82 (2024).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Yu, D., Chojnowski, G., Rosenthal, M. & Kosinski, J. AlphaPulldown—a Python package for protein–protein interaction screens using AlphaFold-Multimer. Bioinformatics 39, btac749 (2023).

    Article 
    PubMed 

    Google Scholar 

  • Wang, Y. et al. CRISPR–Cas9 and CRISPR-assisted cytidine deaminase enable precise and efficient genome editing in Klebsiella pneumoniae. Appl. Environ. Microbiol. 84, e01834–18 (2018).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Wang, Y. et al. A highly efficient CRISPR–Cas9-based genome engineering platform in Acinetobacter baumannii to understand the H2O2-sensing mechanism of OxyR. Cell Chem. Biol. 26, 1732–1742.e5 (2019).

    Article 
    PubMed 

    Google Scholar 

  • Quan, J. & Tian, J. Circular polymerase extension cloning of complex gene libraries and pathways. PLoS ONE 4, e6441 (2009).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Zhu, J. et al. Design of bacteriophage T4-based artificial viral vectors for human genome remodeling. Nat. Commun. 14, 2928 (2023).

  • He, Y. & Chen, J. CRISPR–Cas9-mediated genome editing of T4 bacteriophage for high-throughput antimicrobial susceptibility testing. Anal. Chem. 96, 18301–18310 (2024).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Kim, D., Paggi, J. M., Park, C., Bennett, C. & Salzberg, S. L. Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype. Nat. Biotechnol. 37, 907–915 (2019).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Danecek, P. et al. Twelve years of SAMtools and BCFtools. GigaScience 10, giab008 (2021).

  • Mastronarde, D. N. Automated electron microscope tomography using robust prediction of specimen movements. J. Struct. Biol. 152, 36–51 (2005).

    Article 
    PubMed 

    Google Scholar 

  • Zheng, S. Q. et al. MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy. Nat. Methods 14, 331–332 (2017).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Zivanov, J. et al. New tools for automated high-resolution cryo-EM structure determination in RELION-3. eLife 7, e42166 (2018).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Punjani, A., Zhang, H. & Fleet, D. J. Non-uniform refinement: adaptive regularization improves single-particle cryo-EM reconstruction. Nat. Methods 17, 1214–1221 (2020).

    Article 
    PubMed 

    Google Scholar 

  • Punjani, A., Rubinstein, J. L., Fleet, D. J. & Brubaker, M. A. cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nat. Methods 14, 290–296 (2017).

    Article 
    PubMed 

    Google Scholar 

  • Sanchez-Garcia, R. et al. DeepEMhancer: a deep learning solution for cryo-EM volume post-processing. Commun. Biol. 4, 874 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Emsley, P. & Cowtan, K. Coot: model-building tools for molecular graphics. Acta Crystallogr. D 60, 2126–2132 (2004).

    Article 
    PubMed 

    Google Scholar 

  • Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D 66, 213–221 (2010).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Meng, E. C. et al. UCSF ChimeraX: tools for structure building and analysis. Protein Sci. 32, e4792 (2023).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

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  • Oxford Bus Company reveals list of unusual lost property

    Oxford Bus Company reveals list of unusual lost property

    The company said that about a quarter of the lost property had been reunited with its owners.

    “Misplacing a personal item can be a stressful experience, so we use technology to help make it easier for people to get their belongings back,” said Andy Morison, the firm’s head of digital and customer experience.

    “We encourage people who misplace their items to use our NotLost service via the website which has helped us effectively manage lost property and minimise stress to affected passengers.”

    Passengers who reclaim items pay a £1 administration and storage fee, with a postal return option also available.

    Items left behind in previous years have included a bar stool, a Donald Trump toilet roll and a letter detailing unusual fantasies.

    Last year a suitcase full of retro adult magazines topped the list.

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